From Australian Oceans Data Network
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Sampling of planktonic microorganisms for metagenomic, metaproteomic and metatranscriptomic analyses

Created 13/03/2025

Updated 13/03/2025

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Large volumes of water (200 - 500 L) were filtered and fractionated by size for various planktonic components: eukaryotic phytoplankton, prokaryotic picoplankton, and marine viruses. Sample sites were chosen to generate the widest diversity, and included planktonic blooms, oligotrophic zones, small polynyas near sea ice, nearshore areas, and Antarctic bottom water from coastal, canyon and deepwater areas. Half of each sample will be used for DNA library construction, and the other half will be used for meta-proteomic analysis. Random shotgun sequencing of the marine genomic libraries should produce a metagenomic snapshot of planktonic life in a variety of marine habitats. This work was completed as part of ASAC project 2899 (ASAC_2899).

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Title Sampling of planktonic microorganisms for metagenomic, metaproteomic and metatranscriptomic analyses
Language eng
Licence notspecified
Landing Page https://devweb.dga.links.com.au/data/dataset/5fb04a0c-bcbb-49af-9918-7b6fbc6a0bc9
Contact Point
CSIRO Oceans & Atmosphere
metadata@aad.gov.au
Reference Period 17/12/2007 - 28/01/2008
Geospatial Coverage {"type": "Polygon", "coordinates": [[[140.0, -67.0], [150.0, -67.0], [150.0, -46.0], [140.0, -46.0], [140.0, -67.0]]]}
Data Portal data.gov.au

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This dataset was originally found on data.gov.au "Sampling of planktonic microorganisms for metagenomic, metaproteomic and metatranscriptomic analyses". Please visit the source to access the original metadata of the dataset:
https://devweb.dga.links.com.au/data/dataset/sampling-of-planktonic-microorganisms-for-metagenomic-metaproteomic-and-metatranscriptomic-anal1

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